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SRX5085761: Carbapenem resistant Klebsiella aerogenes Genome sequencing and assembly
1 ILLUMINA (Illumina MiSeq) run: 1.6M spots, 980.6M bases, 584Mb downloads

Design: Nextera XT
Submitted by: University of Rochester
Study: Carbapenem resistant Klebsiella aerogenes at a tertiary care medical center Genome sequencing and assembly
show Abstracthide Abstract
Klebsiella aerogenes are significant nosocomial pathogens associated with outbreaks in intensive care units (ICUs). In 2017, a group of carbapenem-resistant Klebsiella aerogenes was cultured from patients in our cardiac ICU (CICU). Whole genome sequencing (WGS) of CR-EA isolates was undertaken to investigate patient-to-patient transmission, assess phylogeny relative to global strains, and characterize molecular determinants of resistance and virulence.
Sample:
SAMN10405426 • SRS4098170 • All experiments • All runs
Library:
Name: URMC213
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 1.6M spots, 980.6M bases, 584Mb
Run# of Spots# of BasesSizePublished
SRR82688351,571,402980.6M584Mb2018-12-14

ID:
6855727

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